FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004838701

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004838701
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences57539190
Sequences flagged as poor quality0
Sequence length28
%GC47

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
CAAAAGA85050.017.1090974
AACGAAA160100.017.000081
AACGGGA88650.016.4753421
TGACTAC138650.016.23779510
AAAGATG92300.016.0984976
CGGAACC91450.015.9347671
AGGCGCT78200.015.9069768
AGCCACG136900.015.8581591
CGAAACA116650.015.8498263
GGGACCT106700.015.8044861
ATACCGA117250.015.8009331
ACGAAAC99000.015.7096622
ACAAAAG93850.015.6571853
GCCCGAA74650.015.6108091
CTGGACG78250.015.5260421
AGCCGAG60900.015.2789883
CCGGACA77750.015.2575551
AAAAGAT66400.015.2226055
ATCGGCG68350.015.1803571
TGCGACG88550.015.1754261
Produced by FastQC (version 0.11.5)