FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004838731

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004838731
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences62249890
Sequences flagged as poor quality0
Sequence length28
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GCCGTGA120650.018.0785031
CAAACGG181800.017.80612210
CCCGAAG157800.017.4906791
ACATGCA216200.017.46431
CAACGGC181700.017.2614041
CCGGATC139400.017.23307610
GGGATCC145250.017.198711
GCCCGAA105100.017.1617811
GTCCGGA145000.017.1515928
CCGCGGA82450.017.1162629
AAACGCT160550.017.1156881
TACGGAG105500.016.9110810
ACGAGAC99050.016.8462545
ACGGCCA170700.016.805913
CAGCGGG92300.016.7792637
AGGGCTC303750.016.7781721
ACGCTAG172300.016.7264583
GGGACCT133050.016.7244721
AGAGAAC148800.016.6027018
GAAACCT220050.016.5736161
Produced by FastQC (version 0.11.5)