FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004838739

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004838739
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences55709297
Sequences flagged as poor quality0
Sequence length28
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GCCCGAA95450.017.5373171
TACCGGG145750.016.8386081
GGGCTAC105500.016.7429681
GTGGAGA127300.016.7200661
CGGACAC105350.016.6727891
AGTGCGG112400.016.5371692
AAACGAA150150.016.3891471
CCCGGAA81100.016.3657671
CGGAACC98350.016.0690421
TAACGAC100300.015.9980291
AACCTGA119650.015.8942821
AGGATAG104950.015.8682683
ACGCACG118550.015.7261271
TGCGGAG84850.015.6992313
GGAGGAT171600.015.5462351
AGAAAAG73050.015.509693
GGGATAG72500.015.4756283
GCACGAG113100.015.3277963
GCGGAAA83200.015.3177551
CCCGAAG94700.015.2821931
Produced by FastQC (version 0.11.5)