FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004838745

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004838745
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences55708349
Sequences flagged as poor quality0
Sequence length28
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GCCCGAA93900.017.4153791
CGGACAC108450.017.118481
TAACGAC102000.016.679731
TACCGGG147400.016.6788231
GTGGAGA127150.016.5568731
AAACGAA144150.016.367781
GGGCTAC107900.016.2674311
AACCTGA122150.016.1534961
CGGAACC91250.016.1483231
AGTGCGG111200.015.9820252
CCCGGAA80450.015.9770471
AGAAAAG71100.015.9505243
ACGCACG120500.015.8358621
TGCGGAG87100.015.8114643
CCCGAAG93350.015.7968381
AGGATAG103150.015.7932593
GGAGGAT166400.015.7068821
GGAGAAC102250.015.4443021
AAGAACA144150.015.4287711
TGGGCTG122850.015.3537821
Produced by FastQC (version 0.11.5)