FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004838747

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004838747
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences57456322
Sequences flagged as poor quality0
Sequence length28
%GC47

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GCGGAAA137550.019.0666281
GAGACCC146450.017.5243381
CCGGACG99700.017.3746629
GCCCGAA91500.016.8531881
GACGGGT94850.016.7097243
CCGGACA97350.016.4740561
GCACGAG110250.016.4307613
CGACGGG96750.016.4168192
TAACGAC131650.016.4154661
TGACTAG138800.016.2999973
TCGACGG161750.016.2344281
AATGGCT159100.016.214061
GGGAATC142550.016.210693
ACGCACG135400.016.1072581
TGGGAAT144550.015.9792012
AGACACT155600.015.94875051
GAATGAG86900.015.9095613
CGGACGT108550.015.90733410
CGCCAGA126100.015.8713881
CGCGCCA88850.015.85705959
Produced by FastQC (version 0.11.5)