FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004838757

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004838757
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences67822908
Sequences flagged as poor quality0
Sequence length28
%GC47

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GCGGAAA162500.019.1487671
GAGACCC168200.017.216321
CCGGACG113050.017.113029
GCCCGAA107600.016.9111631
GACGGGT116550.016.7693353
CGACGGG117250.016.7123372
ACGCACG157800.016.6896921
CCGGACA120250.016.4511761
TGACTAG159150.016.4202773
GCACGAG133650.016.4095573
GAGACGA74900.016.4022247
GAATGAG107900.016.3094463
TCGACGG191700.016.2952061
TAACGAC149450.016.273421
AATGGCT194550.016.1187731
CGCCAGA149500.016.0764161
AGACACT181750.016.0055161
CGAGACG76100.015.9846276
CGGACGT121250.015.94646210
AGGGAAG83600.015.9323023
Produced by FastQC (version 0.11.5)