FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004838761

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004838761
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences66833372
Sequences flagged as poor quality0
Sequence length28
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GCGGAAA163950.019.2212981
CCGGACG117850.017.1531629
GAGACCC173600.017.0678521
GCACGAG130750.016.9419573
TAACGAC148650.016.8278451
GCCCGAA104100.016.8237461
CGACGGG113950.016.722652
GACGGGT114000.016.6718853
AATGGCT191850.016.6556741
ACGCACG156850.016.6433261
GAGACGA73800.016.378337
TGACTAG155150.016.2837723
AGGGAAG82000.016.2165413
GAATGAG100150.016.198953
TCGACGG188950.016.1010071
GGGAATC166050.016.0627043
CCGGACA119950.016.0423851
AGCTGAC133050.015.863118
CGGACGT127500.015.84627710
AGACACT183100.015.8394041
Produced by FastQC (version 0.11.5)