FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004838783

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004838783
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences60104931
Sequences flagged as poor quality0
Sequence length28
%GC47

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GGGACCT157250.017.1964341
GCGGTGG94150.017.020895
CCGGACA106100.016.5274261
GCACGTG171000.016.4835871
CGCGGTG75500.016.1412014
GACCGTG122150.015.9608991
CTGGACG83600.015.9293341
CGGTGGC112050.015.6658626
ACGGTCG220850.015.5808521
CACCCAA160250.015.559138
CCGGTGA117300.015.5315591
CACCGTG161750.015.442048
GCCCGAA73850.015.3625841
TGCGACG94450.015.3122971
GGTGGCA102500.015.2690797
GAGACCC124450.015.2322311
ACATGGC128250.015.2134627
TCCCGAA103900.015.1162658
CTGCGAG106500.015.1001341
GGACATG141050.015.0964655
Produced by FastQC (version 0.11.5)