FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004838789

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004838789
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences63946779
Sequences flagged as poor quality0
Sequence length28
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GCCCGAA123250.017.3555951
TAGCGAC73600.016.676887
GGGCTAC126400.016.6006491
GCGGAAA95750.016.5308481
CCCGGAA99500.016.3395651
TGGGAAG155000.016.252181
CTGGACG96400.016.2251421
ATCGGCG115500.016.1932071
CGGAACC102300.015.7954371
GAAGGGT124900.015.6359211
GCAGACC97200.015.4678767
GTGGAAC90850.015.38682658
AACGGGA86600.015.3266171
GTGCCCA123500.015.281958
GGGATCC113800.015.2155431
TTAATCC163750.015.1819461
GGGACCT117000.015.0912361
CGTGGCC116200.014.9074337
GCCAACG146600.014.8842751
TTGGATG140700.014.88213351
Produced by FastQC (version 0.11.5)