FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004838791

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004838791
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences66706583
Sequences flagged as poor quality0
Sequence length28
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GCCCGAA119550.017.3215181
GGGCTAC126250.016.803611
TAGCGAC73900.016.5942737
GCGGAAA98400.016.4326881
TGGGAAG158500.016.3936771
CCCGGAA102800.016.0615041
GCAGACC99200.015.9986177
CGGAACC106950.015.9944141
CTGGACG99400.015.9016881
ATCGGCG117800.015.8490091
GAAGGGT134000.015.5193991
GGGACCT123400.015.4689591
CGTGGCC119050.015.3450387
GTGGAAC91300.015.2748278
AACGGGA90050.015.2042531
TTAATCC177200.015.0801181
AGACAGG159200.014.9585781
GGGATCC112950.014.8912281
GTGCCCA129650.014.8624138
GCCAACG152200.014.7491581
Produced by FastQC (version 0.11.5)