FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004838795

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004838795
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences64643129
Sequences flagged as poor quality0
Sequence length28
%GC48

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GCCCGAA115400.017.2854331
GGGCTAC121650.016.6418271
GCGGAAA97100.016.561561
ATCGGCG116800.016.1635071
TAGCGAC73450.016.1570327
CGGAACC105150.016.152611
CCCGGAA102600.016.0172941
TGGGAAG154150.015.9127171
CTGGACG94750.015.5424621
GCAGACC101500.015.5278777
GTGGAAC89600.015.4911378
AACGGGA93200.015.4582191
GGGACCT116650.015.4572261
GAAGGGT126400.015.4326011
AAGAGAC82000.015.08964355
CGTGGCC116150.015.0465387
GTGCCCA128500.015.0383638
GGGATCC118800.014.9364271
GCCAACG148550.014.8516911
TTGGATG144300.014.8158591
Produced by FastQC (version 0.11.5)