FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004838797

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004838797
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences68903935
Sequences flagged as poor quality0
Sequence length28
%GC48

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GCCCGAA124200.017.506271
TGGGAAG159550.016.3406581
CTGGACG99150.016.3191361
TAGCGAC74050.016.2637377
GGGCTAC133800.016.1678921
GCGGAAA104800.015.9438191
GGGATCC119700.015.7259181
ATCGGCG118450.015.7244921
GCAGACC106050.015.6913227
GAAGGGT136400.015.6416771
GTGCCCA135750.015.5477118
CCCGGAA107600.015.5289251
CGGAACC109700.015.4224241
GGGACCT125800.015.409911
AACGGGA92750.015.1769671
AGACAGG169450.015.1389591
GTGGAAC97650.015.1376468
TTAATCC183400.015.0624721
CGTGGCC128100.015.0509577
AAGAGAC87000.014.9556935
Produced by FastQC (version 0.11.5)