FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004838801

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004838801
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences75501535
Sequences flagged as poor quality0
Sequence length28
%GC47

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GCGGTGG118050.017.3108145
GGGACCT196850.017.1946221
CCGGACA133550.016.72591
CGCGGTG92800.016.6756944
GCACGTG217950.016.2728821
CGGTGGC142150.015.9850926
GCCCGAA90300.015.7228271
GACCGTG154900.015.7075991
AGAAGAC82200.015.6148135
ACGGTCG271100.015.5690261
GGTGGCA129250.015.4786677
CTGGACG110800.015.448161
CACCGTG201150.015.4300888
ACATGGC158250.015.3665537
CACCCAA207750.015.3634178
CCGGTGA155950.015.3052011
GAGACCC153650.015.2403941
TGCGACG119800.015.2070211
CGGAGAA155000.015.1645031
GATCCGA131500.015.1301956
Produced by FastQC (version 0.11.5)