FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004838805

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004838805
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences75930315
Sequences flagged as poor quality0
Sequence length28
%GC47

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GCGGTGG119300.017.4247265
GGGACCT195650.017.2159841
CCGGACA134250.016.6062091
CGCGGTG95400.016.4866454
GCACGTG224850.016.4498541
ACGGTCG277000.015.997221
CGGTGGC140600.015.9579526
GACCGTG151700.015.7851321
GGTGGCA128950.015.5573267
CGGAGAA147100.015.5449361
GCCCGAA89500.015.5190931
ACATGGC159900.015.3799457
TGCGACG121200.015.3679261
TGCCGAG147400.015.3563711
AGAAAAG82950.015.341313
CACCCAA202200.015.3282058
CTGGACG102000.015.301851
CGGGAGA47950.015.2537854
AGAAGAC79600.015.1855045
AGGGAAG91700.015.1848263
Produced by FastQC (version 0.11.5)