FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004838807

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004838807
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences59297896
Sequences flagged as poor quality0
Sequence length28
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GGGACCT158500.017.4081461
GCGGTGG96050.017.2910695
CCGGACA104300.016.6118681
CGCGGTG75800.016.3820044
GCACGTG170200.016.2697091
CGGTGGC113000.016.0207446
GACCGTG122500.015.7982781
GCCCGAA73350.015.7825321
ACGGTCG213350.015.7515631
ACATGGC124250.015.5703167
TGCGACG92300.015.4659781
GGACATG141450.015.4425345
CTGGACG82750.015.4006631
AGAAGAC63350.015.38258655
CACCCAA166050.015.3533298
GGTGGCA102250.015.3062777
CTGCCTA149750.015.2330671
CACCGTG155050.015.2154058
CCGGTGA124400.015.16739751
AGGGAAG76050.015.0989033
Produced by FastQC (version 0.11.5)