FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004838813

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004838813
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences74882694
Sequences flagged as poor quality0
Sequence length28
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GGGACCT195650.017.3117891
GCGGTGG117900.017.230315
CCGGACA129250.016.5669441
GCACGTG215750.016.4545571
CGCGGTG94450.016.431044
CGGTGGC138450.016.1422066
GGTGGCA124500.015.9543067
ACGGTCG268850.015.8021541
GACCGTG150600.015.7322961
GCCCGAA90850.015.72503951
CACCCAA205200.015.5542698
ACATGGC157300.015.5152267
GAGACCC154850.015.5067921
CGGAGAA150000.015.3326041
AGAAGAC82500.015.3314725
GGACATG175550.015.255915
CGGGAGA45800.015.17719654
CTGCCTA174550.015.1575781
CGGAACC116350.015.1471271
CACCGTG199950.015.1265838
Produced by FastQC (version 0.11.5)