FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004838817

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004838817
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences46720263
Sequences flagged as poor quality0
Sequence length28
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TGCGACG117900.018.0437641
CTGAGCG129550.017.8738211
GCCCGAA89500.017.793221
AGCGAGC90250.017.635634
TCCCGAC151700.017.4671410
CAGGAAT127150.017.1457678
GCGACGC62400.017.0897312
GTGAACA127000.016.9672533
AAAAGGG63300.016.9074765
CAATGGC122050.016.8348318
GCGACGA42300.016.7548892
AGAAAAG76650.016.7327463
GAAAAGG71950.016.6940424
GCGAGCC81650.016.5024935
AATCGAC144550.016.4073431
TTGGGCG98750.016.3494111
GAGCGAG83800.016.3420353
GTCCCGA162700.016.2997259
CTGAAAG84050.016.280343
GCGGAAA61550.016.2534261
Produced by FastQC (version 0.11.5)