FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004838821

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004838821
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences68905461
Sequences flagged as poor quality0
Sequence length28
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TGCGACG178150.017.8903521
CTGAGCG189550.017.8420581
GCCCGAA135800.017.837191
AGCGAGC124550.017.8128284
TCCCGAC226950.017.51092510
CAGGAAT186850.017.2305858
GTGAACA192400.017.059813
GCGACGC92550.017.0396562
AATCGAC222500.016.9161781
CAATGGC181750.016.7155118
GCGACGA64150.016.67482
GAAAAGG102250.016.6201884
GCGAGCC113450.016.5985435
AGAAAAG111700.016.5930883
GCGGAAA89450.016.5727061
GAGCGAG119150.016.3956783
AAAAGGG92850.016.3718175
GTCCCGA243450.016.34679
GGTTAAG223550.016.331013
AATGGCT186800.016.2253191
Produced by FastQC (version 0.11.5)