FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004838823

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004838823
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences46733712
Sequences flagged as poor quality0
Sequence length28
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TGCGACG122900.017.8815231
CTGAGCG124600.017.8671881
AGCGAGC88200.017.8211864
GCCCGAA92800.017.7166231
TCCCGAC152650.017.6539810
GCGACGC62150.017.4402432
GCGACGA42750.017.066122
TTGGGCG98000.016.922541
AGAAAAG73150.016.9020483
CAGGAAT123850.016.9011278
CAATGGC120950.016.8334648
GTGAACA130050.016.8148633
GAAAAGG69550.016.6376324
GCGAGCC78100.016.6330475
AATCGAC149800.016.5144021
GTCCCGA164900.016.3625229
GGCGCAG43900.016.311334
GAGCGAG79800.016.3068143
CCCTAAC155900.016.2282311
GGTTAAG148550.016.2239673
Produced by FastQC (version 0.11.5)