FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004838831

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004838831
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences44827257
Sequences flagged as poor quality0
Sequence length28
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GCCCGAA89950.017.7892461
CCCGGAA72550.016.6100521
CCGGACA78550.016.532181
AAACGAA96100.016.1698361
GGGCTAC96050.016.098051
CGAAAAG68550.015.9981683
AGGGAAG56400.015.9340263
GAAGGGT97900.015.5128171
CTGGACG64100.015.4346211
GCGGAAA62200.015.4283831
GTGGAAC64650.015.3975628
AACAACC142950.015.1199931
CGGGATC58150.015.0194263
TACCGAA93500.014.9834251
CAATTGC118000.014.8213248
AAACGCT88550.014.8143291
GGAGGAT85650.014.8019661
ATCGGCG61050.014.7816341
CCGGGTA81200.014.7728661
GCCGTGA64700.014.7301751
Produced by FastQC (version 0.11.5)