FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004838839

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004838839
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences44910173
Sequences flagged as poor quality0
Sequence length28
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
GCCCGAA84150.017.6299651
GGGCTAC95400.017.3044781
CCGGACA77000.016.7371621
CGAAAAG66150.016.312493
CCCGGAA72600.016.205291
AAACGAA95650.016.1776711
GAAGGGT101250.015.7285671
CTGGACG62150.015.6540531
AACGGGA64000.015.51108551
GCGGAAA61500.015.4794891
AGGGAAG57750.015.3900643
AAACGCT88350.015.2845861
TACCGAA96000.015.2359451
CAATTGC121550.015.19370658
GTGGAAC69450.015.0934558
AGCTCGA73650.015.009338
GGAGGAT89050.015.0037711
CCGGGTA80900.014.9644171
TCGCCGA61550.014.9398518
ATCGGCG65650.014.7524311
Produced by FastQC (version 0.11.5)