FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004838849

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004838849
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences56443297
Sequences flagged as poor quality0
Sequence length28
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TGCGACG138900.017.6919061
CTGAGCG151150.017.6851021
AGCGAGC98950.017.6191674
GCCCGAA105400.017.4784551
TCCCGAC184150.017.4415310
CAGGAAT155150.017.1000528
GTGAACA160700.017.0166973
GGGCTAC96850.016.8397921
CAATGGC147500.016.7564878
AATCGAC176050.016.6777691
GCGACGC71550.016.5028532
TTGGGCG121650.016.5006451
AGAAAAG93100.016.493993
GCGACGA50450.016.4685252
AATGGCT150700.016.4453581
GGCGCAG54400.016.4183334
GAAAAGG85250.016.3347024
CTGAAAG108450.016.3198623
GCGAGCC91200.016.2218115
GTCCCGA199000.016.1676259
Produced by FastQC (version 0.11.5)