FastQCFastQC Report
Sat 23 Apr 2022
EGAF00004838851

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004838851
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences68936298
Sequences flagged as poor quality0
Sequence length28
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

[FAIL]Kmer Content

Kmer graph

SequenceCountPValueObs/Exp MaxMax Obs/Exp Position
TGCGACG177200.018.0473671
CTGAGCG187750.017.930051
AGCGAGC125950.017.7196984
GCGACGC93950.017.6982672
GCCCGAA135850.017.6838191
TCCCGAC230550.017.48088510
CAGGAAT185400.017.329838
AGAAAAG115250.016.9508253
CAATGGC182600.016.7642788
AATCGAC223000.016.7539371
GCGAGCC113750.016.7288915
GAGCGAG117000.016.6690833
GGGCTAC123600.016.6674561
GTGAACA195100.016.6492613
GAAAAGG105550.016.5695744
GCGACGA62650.016.563562
AAAAGGG94300.016.5633875
TTGGGCG146200.016.379231
GTCCCGA249450.016.2225599
CCCTAAC238950.016.202081
Produced by FastQC (version 0.11.5)