FastQCFastQC Report
Wed 27 Apr 2022
EGAF00004842281

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004842281
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences35650719
Sequences flagged as poor quality0
Sequence length35-43
%GC45

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG1109540.31122513966688864No Hit
GGGCCGGTTCACCCCTCCTTAGGCAACCTGGTGGTCCCCCGCT763880.21426776834430747No Hit
GCTCCGTTTCCGACCTGGGCCGGTTCACCCCTCCTTAGGCAAC755200.2118330348400547No Hit
GGGCCAGTTCACCCCTCCTTAGGCAACCTGGTGGTCCCCCGCT481890.13516978437377378No Hit
TGGTCCAAGGCTTGTTAGGATAGTTAAGAAAGCTGCCTATTGG387580.10871589995141472No Hit
GGGCTGGTTCACCCCTCCTTAGGCAACCTGGTGGTCCCCCGCT357530.10028689743957198No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)