EGAF00004842294 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00004842294
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	33388475
Sequences flagged as poor quality	0
Sequence length	75
%GC	47

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
ACTCGGGAGGCTGAGGCTGGAGGATCGCTTGAGTCCAGGAGTTCTGGGCTGTAGTGCGCTATGCCGATCGGGTGT	48605	0.14557418390627305	No Hit
GCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGCTGGAGGATCGCTTGAGTCCAGGA	48297	0.1446517099088832	No Hit
ACTCGGGAGGCTGAGGTGGGAGGATCGCTTGAGCCCAGGAGTTCTGGGCTGTAGTGCGCTATGCCGATCGGGTGT	45465	0.13616974120561062	No Hit
GAACCCGACTCCCTTTCGATCGGCCGAGGGCAACGGAGGCCATCGCCCGTCCCTTCGGAACGGCGCTCGCCCATC	41801	0.12519589469120707	No Hit
GCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGTGGGAGGATCGCTTGAGCCCAGGA	34414	0.1030714939810818	No Hit
GGGCTGTAGTGCGCTATGCCGATCGGGTGTCCGCACTAAGTTCGGCATCAATATGGTGACCTCCCGGGAGCGGGG	34291	0.10270310339121508	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TCGATCG	8360	37.09475	16
CGCTCGC	9230	33.78848	64
ACGGCGC	9400	33.581673	60
GGTGTGC	44735	33.40412	7
CGGTCGA	5370	33.27762	69
AACGGCG	9830	32.07783	59
TCGGCCG	9865	31.856009	20
ATCGGCC	10085	31.297108	19
TCGCCCG	10210	30.94893	43
TCTTCCG	31925	30.805338	14
TTCGATC	10600	30.62265	15
CTTCCGA	30345	30.328974	15
GCGACAT	6510	30.309172	5
CGCCCGT	10350	30.263659	44
GTGCTCT	45645	30.214071	10
GTGTGCT	57985	29.881828	8
TTCCGAT	26450	29.578518	16
TCCGATC	25525	29.326012	17
TGCGACA	6760	29.296116	4
TGTGCTC	51490	29.169247	9