FastQCFastQC Report
Sat 4 Jun 2022
EGAF00004842337

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004842337
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences53849809
Sequences flagged as poor quality0
Sequence length35-86
%GC46

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GCCGGGCGCGGTGGCGCGTGCCTGTAGTCCCAGCTACTCGGGAGGCTGAG1334400.24780032181729744No Hit
GGCTGCGACATCTGTCACCCCATTGATCGCCAGGGTTGATTCGGCTGATC976460.18133026247131165No Hit
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN879970.1634119073662824No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)