EGAF00004842551 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00004842551
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	128553
Sequences flagged as poor quality	0
Sequence length	300-14954
%GC	50

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
AAGCAGTGGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT	14185	11.034359369287376	No Hit
AAGCAGTGGTATCACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT	477	0.3710531842897482	No Hit
AAGCAGTGGTATCAACGCAGAGTATTTTTTTTTTTTTTTTTTTTTTTTTT	456	0.3547175095096964	No Hit
AAGCATGGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT	418	0.325157717050555	No Hit
AAGCAGTGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT	394	0.30648837444478155	No Hit
AGCAGTGGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT	364	0.28315169618756464	No Hit
AAAGCAGTGGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTT	245	0.19058287243393776	No Hit
AAGCAGTGGTATCAACGCAGATACTTTTTTTTTTTTTTTTTTTTTTTTTT	154	0.11979494838704659	No Hit
AAGCGTGGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT	139	0.10812660925843816	No Hit
AAGCAGTGGTATCAACGCAAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT	138	0.1073487199831976	No Hit
AAGCAGTGGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTG	133	0.10345927360699478	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
AAGCAGT	5195	414.5087	1
AGCAGTG	5360	399.00323	2
AGTGGTA	4880	396.03275	5
GTGGTAT	4780	390.46442	6
CAGTGGT	5210	379.8923	4
GCAGTGG	5475	366.4324	3
TGGTATC	5145	361.81046	7
GGTATCA	5210	358.23798	8
GTATCAA	5265	340.055	9
GTGTATC	440	245.25883	6
AGTGTAT	475	227.18713	5
CAGTGTA	545	216.0078	4
ATGGTAT	475	191.04373	5
CATGGTA	545	184.50665	4
AAGCATG	760	183.94414	1
GTATCAC	550	182.82933	9
TGTATCA	625	176.58636	7
GCAGTGT	805	167.56816	3
GCATGGT	660	156.07382	3
AGCATGG	755	155.92616	2