EGAF00004842589 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00004842589
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	947404
Sequences flagged as poor quality	0
Sequence length	300-14997
%GC	45

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
AAGCAGTGGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT	118260	12.48253121160561	No Hit
AAGCAGTGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT	7761	0.8191859016850257	No Hit
AAGCAGTGGTATCAACGCAGAGTATTTTTTTTTTTTTTTTTTTTTTTTTT	6852	0.7232395050052565	No Hit
AAAGCAGTGGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTT	3600	0.3799857294248283	No Hit
AAGCAGTGGTATCACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT	2813	0.2969166269089005	No Hit
AGCAGTGGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT	2685	0.28340602319601776	No Hit
TAAGCAGTGGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTT	1928	0.20350346842529693	No Hit
AAGCATGGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT	1667	0.17595450304199686	No Hit
AAGCAGTGGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTG	1423	0.15019991471431407	No Hit
GCAGTGGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT	1367	0.14428902558992784	No Hit
AAGCAGTGGTATCAAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTT	955	0.1008017698890864	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
AAGCAGT	46485	366.64487	1
AGCAGTG	49105	344.6729	2
GTGGTAT	44025	335.00302	6
AGTGGTA	44795	333.3167	5
TGGTATC	44315	328.02686	7
CAGTGGT	46450	325.36783	4
GGTATCA	44585	323.71826	8
GCAGTGG	48125	318.70462	3
GTATCAA	47135	300.45233	9
GTGTATC	6495	212.53867	6
CAGTGTA	7420	200.32838	4
AGTGTAT	7205	197.06866	5
GCAGTGT	8235	191.57791	3
TGTATCA	7845	177.53525	7
AAGCATG	4895	118.34345	1
CATGGTA	3530	115.92109	4
GCATGGT	3985	108.87129	3
AAGCGTG	2090	99.07455	1
GTATCAC	5000	97.61672	9
ATGGTAT	4205	93.79573	5