EGAF00004842592 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00004842592
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	896757
Sequences flagged as poor quality	0
Sequence length	300-15000
%GC	47

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
AAGCAGTGGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT	103435	11.534339849033797	No Hit
AAGCAGTGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT	6264	0.6985169895523536	No Hit
AAGCAGTGGTATCAACGCAGAGTATTTTTTTTTTTTTTTTTTTTTTTTTT	6000	0.6690775761995724	No Hit
AAAGCAGTGGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTT	3875	0.43211260129555723	No Hit
AAGCAGTGGTATCACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT	2511	0.28000896563952105	No Hit
AGCAGTGGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT	2487	0.2773326553347228	No Hit
TAAGCAGTGGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTT	2114	0.23573833268098268	No Hit
AAGCATGGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT	1612	0.1797588421389518	No Hit
AAGCAGTGGTATCAAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTT	1018	0.11352016209519412	No Hit
AAGCAGTGGTATCAACGCAGATACTTTTTTTTTTTTTTTTTTTTTTTTTT	967	0.10783300269749775	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
AAGCAGT	43870	356.34555	1
AGCAGTG	47600	325.98758	2
GTGGTAT	41990	321.4545	6
AGTGGTA	43020	319.77542	5
TGGTATC	42605	312.87946	7
GGTATCA	42695	311.00732	8
CAGTGGT	45355	308.31332	4
GCAGTGG	46195	306.49622	3
GTATCAA	44920	289.3456	9
GTGTATC	6005	190.49617	6
CAGTGTA	6975	180.26326	4
AGTGTAT	6735	178.63373	5
GCAGTGT	8025	168.35143	3
TGTATCA	7180	162.7553	7
AAGCGTG	2045	144.6669	1
AAGCATG	5110	122.54457	1
CATGGTA	3485	121.67657	4
CGTGGTA	1725	117.19417	4
GCATGGT	3840	114.27995	3
GTATCAC	4310	111.542046	9