EGAF00004842595 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00004842595
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	959568
Sequences flagged as poor quality	0
Sequence length	300-14996
%GC	48

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
AAGCAGTGGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT	132996	13.859986994147366	No Hit
AAGCAGTGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT	8625	0.8988419788905007	No Hit
AAGCAGTGGTATCAACGCAGAGTATTTTTTTTTTTTTTTTTTTTTTTTTT	7085	0.7383530922248345	No Hit
AAAGCAGTGGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTT	3743	0.3900713654477848	No Hit
AAGCAGTGGTATCACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT	3141	0.32733480066029713	No Hit
AGCAGTGGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT	2781	0.2898179180631284	No Hit
TAAGCAGTGGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTT	2077	0.21645156987310957	No Hit
AAGCATGGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT	1661	0.17309872776082572	No Hit
AAGCAGTGGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTG	1099	0.11453070548413453	No Hit
AAGCAGTGGTATCAACGCAGATACTTTTTTTTTTTTTTTTTTTTTTTTTT	1088	0.11338435629366549	No Hit
GCAGTGGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT	1057	0.11015373584779818	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
AAGCAGT	51140	384.02988	1
AGCAGTG	54720	355.4368	2
GTGGTAT	48180	350.78723	6
AGTGGTA	48995	350.03305	5
TGGTATC	49050	340.49506	7
CAGTGGT	51215	340.0579	4
GGTATCA	49055	338.65152	8
GCAGTGG	52825	334.4062	3
GTATCAA	51500	316.44775	9
GTGTATC	6550	235.94058	6
CAGTGTA	7600	219.2348	4
AGTGTAT	7395	218.97957	5
GCAGTGT	8915	199.06161	3
TGTATCA	7880	196.43092	7
AAGCGTG	2295	124.58096	1
AAGCATG	4895	124.37144	1
CATGGTA	3425	123.77824	4
GTATCAC	4845	120.56769	9
ATGGTAT	3565	114.7691	5
CGTGGTA	1915	113.26358	4