FastQCFastQC Report
Fri 1 Jul 2022
EGAF00004851021

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004851021
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences30220829
Sequences flagged as poor quality0
Sequence length150
%GC52

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT1018350.33696957816742884No Hit
CATGAATCCACTCCTGATCCTTACCTTTGTGGCAGCTGCTCTTGCTGCCC958950.31731426030702203No Hit
GACGGAACTGCCACGATGCTGCCACTTTGGACTCTTTCACTGCTGCTGGG450530.14907929891665117No Hit
CATGAATCTACTTCTGATCCTTACCTTTGTTGCAGCTGCTGTTGCTGCCC404800.13394735134499455No Hit
GTCGGCGCCAGAGCTCGCAGTGTTGCCCCAGCCAGAGATGAGGCACTTCG337420.11165147058010885No Hit
GCCGGTTTTGTCCTGCAGGGACACCTGCCAGGGCCAGGAGCCGGGGACGG335000.11085069837098115No Hit
ATCCACTCCTGATCCTTACCTTTGTGGCAGCTGCTCTTGCTGCCCCCTTT314330.10401104483268807No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)