FastQCFastQC Report
Thu 12 May 2022
EGAF00004851038

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004851038
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences29599999
Sequences flagged as poor quality0
Sequence length150
%GC52

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CATGAATCCACTCCTGATCCTTACCTTTGTGGCAGCTGCTCTTGCTGCCC1214550.41032095980814054No Hit
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT594400.20081081759496006No Hit
GACGGAACTGCCACGATGCTGCCACTTTGGACTCTTTCACTGCTGCTGGG525260.17745270869772664No Hit
ATCCACTCCTGATCCTTACCTTTGTGGCAGCTGCTCTTGCTGCCCCCTTT363160.12268919333409438No Hit
CGGAACTGCCACGATGCTGCCACTTTGGACTCTTTCACTGCTGCTGGGAG334400.1129729767896276No Hit
CTCCACTATAATCTTGGATGCTCCCACTCTAGGTAAAGTTGGGTTGATCA318250.10751689552421945No Hit
GTCGGCGCCAGAGCTCGCAGTGTTGCCCCAGCCAGAGATGAGGCACTTCG313130.1057871657360529No Hit
GAATCCACTCCTGATCCTTACCTTTGTGGCAGCTGCTCTTGCTGCCCCCT305240.1031216251054603No Hit
CATGAATCTACTTCTGATCCTTACCTTTGTTGCAGCTGCTGTTGCTGCCC299800.10128378720553335No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)