FastQCFastQC Report
Wed 27 Apr 2022
EGAF00004852253

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004852253
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences114053802
Sequences flagged as poor quality0
Sequence length8
%GC53

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GCCACGCT3713267132.557153158296295No Hit
AAGGGTGA2893758825.371874933200385No Hit
CGTTAATC2586863622.68108168809664No Hit
TTACTCAG2059290818.055433171793783No Hit
AAGGCTGA1536230.1346934493249072No Hit
GCCACGCA1494850.13106533704154816No Hit
AAGCGTGA1172910.10283830783650684No Hit

[WARN]Adapter Content

Can't analyse adapters as read length is too short (12 vs 0)

Produced by FastQC (version 0.11.9)