FastQCFastQC Report
Sat 2 Jul 2022
EGAF00004852335

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004852335
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences290579496
Sequences flagged as poor quality0
Sequence length26
%GC50

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TGCCCTCCAATGGATCCTCGTTAAAG4225680.14542251116025062No Hit
ACGGGCTGTTAATTGTCAGTTCAGTG4174360.14365638517041132No Hit
CCTCTATATAAATGCGTAGGGGTTTT3322250.11433187976897036No Hit
GTGGGCAAATTTAAAGTTGAACTAAG3218960.11077725869549997No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)