FastQCFastQC Report
Wed 27 Apr 2022
EGAF00004852351

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004852351
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences89074083
Sequences flagged as poor quality0
Sequence length28
%GC47

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTCTCGTTCGTTATCGGAATTAACCAGA2126750.23876193033612256No Hit
CCTCTATATAAATGCGTAGGGGTTTTAG1056740.11863607958781903No Hit
CCACCTACTAAGAACGGCCATGCACCAC1008540.11322485351884005No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)