EGAF00004852512 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00004852512
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	19828283
Sequences flagged as poor quality	0
Sequence length	151
%GC	47

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
TGTTCCGTTGGTCAAGTTATTGGATCAATTGAGTATAGTAGTTCGCTTTG	170494	0.8598525651464628	No Hit
CCTCTATATAAATGCGTAGGGGTTTTAGTTAAATGTCCTTTGAAGTATAC	103784	0.5234139536943264	No Hit
CAGATCACGTAGGACTTTAATCGTTGAACAAACGAACCTTTAATAGCGGC	82780	0.41748445894180547	No Hit
AAACGGGGGAAGGCGCTTTGTGAAGTAGGCCTTATTTCTCTTGTCCTTTC	47732	0.24072684457852453	No Hit
CAGTCCTTTCGTACAGGGAGGAATTTGAAGTAGATAGAAACCGACCTGGA	44426	0.2240536913861881	No Hit
GGATTACTCCGGTCTGAACTCAGATCACGTAGGACTTTAATCGTTGAACA	41017	0.20686107818816182	No Hit
GGTGAAGTCTTAGCATGTACTGCTCGGAGGTTGGGTTCTGCTCCGAGGTC	39243	0.1979142621678337	No Hit
GCCTCTATATAAATGCGTAGGGGTTTTAGTTAAATGTCCTTTGAAGTATA	29612	0.14934222998531946	No Hit
AACTCAGATCACGTAGGACTTTAATCGTTGAACAAACGAACCTTTAATAG	29039	0.14645241849735552	No Hit
GTAGGCCTTATTTCTCTTGTCCTTTCGTACAGGGAGGAATTTGAAGTAGA	28215	0.1422967384518367	No Hit
CAGTCCTTTGAAGTATACTTGAGGAGGGTGACGGGCGGTGTGTACGCGCT	20163	0.10168807858955817	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TCCGTAA	11820	123.25794	5
GATATAG	190925	120.89502	145
CCGTAAT	12225	118.87824	6
GTCGCGA	6650	118.41608	8
TCGCGAA	6835	115.316956	9
TTCCGTA	12850	112.18532	4
ATGCGAT	8305	111.26652	1
CGTAATT	13055	111.260315	7
GTCGAAT	7395	111.0907	7
GTCGATA	10915	110.30878	9
CGATTGA	4950	110.14297	1
CGAATCC	7655	109.68343	9
CAAGTCG	10050	108.34609	6
AGTCGAT	11140	108.34094	8
CGTTGGG	10760	108.218285	1
TACGAGA	5740	108.211464	4
TACCTTA	11665	106.48146	1
GCGCCAA	10780	105.29838	1
TGTCGCG	7395	105.21288	7
ACGTACT	5955	104.01708	6