EGAF00004852570 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00004852570
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	4620813
Sequences flagged as poor quality	0
Sequence length	151
%GC	50

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTGATGGCTCAAACACAGCGACCTCGGGTGGGAACACGTTTTTCAGGTCC	84026	1.8184245932479848	No Hit
CTGATGGCTCAAACACAGCGACCTCGGGTGGGAACACCTTGTTCAGGTCC	47397	1.0257285893196717	No Hit
TCTGATGGCTCAAACACAGCGACCTCGGGTGGGAACACGTTTTTCAGGTC	42751	0.9251835120789351	No Hit
TCTGATGGCTCAAACACAGCGACCTCGGGTGGGAACACCTTGTTCAGGTC	23982	0.518999578645576	No Hit
GATGGCTCAAACACAGCGACCTCGGGTGGGAACACGTTTTTCAGGTCCTC	11209	0.2425763604802878	No Hit
TGATGGCTCAAACACAGCGACCTCGGGTGGGAACACGTTTTTCAGGTCCT	9266	0.2005274829342802	No Hit
GATGGCTCAAACACAGCGACCTCGGGTGGGAACACCTTGTTCAGGTCCTC	6698	0.14495284704228456	No Hit
TGATGGCTCAAACACAGCGACCTCGGGTGGGAACACCTTGTTCAGGTCCT	5518	0.11941621528505915	No Hit
AGTCTCTCAGCTGGTACACGGCAGGGTCAGGGTTCTGGATATGGTTGTTG	4874	0.10547927388535308	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TCTGATG	10650	118.656746	1
AGTCTCT	14395	103.79436	1
GTCTCTC	16920	87.38797	2
TCTCTCA	16980	87.354485	3
CTGATGG	29155	82.68625	1
GGCTCAA	31690	75.790794	6
CTCAAAC	32065	75.69575	8
GATGGCT	31625	75.41933	3
GCTCAAA	32090	75.00421	7
TCAAACA	33210	73.1296	9
AGCTGGT	20495	72.408104	9
TCAGCTG	21155	70.08056	7
CAGCTGG	21085	70.038155	8
TGATGGC	34745	69.68813	2
ATGGCTC	35290	67.77236	4
TGGCTCA	36935	65.087616	5
CTCTCAG	24685	60.705677	4
CTCAGCT	24685	60.646286	6
TCCGATC	785	36.017387	6
ACCCCTC	4745	35.140957	145