EGAF00004852573 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00004852573
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	8678345
Sequences flagged as poor quality	0
Sequence length	151
%GC	51

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTGATGGCTCAAACACAGCGACCTCGGGTGGGAACACGTTTTTCAGGTCC	214284	2.4691804716221815	No Hit
CTGATGGCTCAAACACAGCGACCTCGGGTGGGAACACCTTGTTCAGGTCC	120664	1.3904033545566579	No Hit
TCTGATGGCTCAAACACAGCGACCTCGGGTGGGAACACGTTTTTCAGGTC	109640	1.2633745259032685	No Hit
TCTGATGGCTCAAACACAGCGACCTCGGGTGGGAACACCTTGTTCAGGTC	59667	0.6875389259127171	No Hit
GATGGCTCAAACACAGCGACCTCGGGTGGGAACACGTTTTTCAGGTCCTC	28883	0.33281691382400674	No Hit
TGATGGCTCAAACACAGCGACCTCGGGTGGGAACACGTTTTTCAGGTCCT	22677	0.26130558303455326	No Hit
GATGGCTCAAACACAGCGACCTCGGGTGGGAACACCTTGTTCAGGTCCTC	16428	0.18929876606657145	No Hit
TGATGGCTCAAACACAGCGACCTCGGGTGGGAACACCTTGTTCAGGTCCT	12893	0.14856519301779314	No Hit
AGTCTCTCAGCTGGTACACGGCAGGGTCAGGGTTCTGGATATACGGATGA	11355	0.13084291993461888	No Hit
AGTCTCTCAGCTGGTACACGGCAGGGTCAGGGTTCTGGATATTTGGCTTC	11335	0.1306124612469313	No Hit
AGTCTCTCAGCTGGTACACGGCAGGGTCAGGGTTCTGGATATTGGGTTTC	9698	0.11174941765970355	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TCTGATG	25960	117.02177	1
AGTCTCT	33935	100.83695	1
GTCTCTC	36485	93.96801	2
TCTCTCA	38600	88.66935	3
CTGATGG	69865	85.74414	1
CTCAAAC	78570	76.28129	8
GGCTCAA	77965	76.110725	6
GATGGCT	78105	75.98358	3
GCTCAAA	78910	75.3738	7
TCAAACA	79865	74.908226	9
ATGGCTC	82455	72.07211	4
TCAGCTG	47750	71.647896	7
TGATGGC	86525	69.600914	2
AGCTGGT	50060	68.37069	9
CAGCTGG	50960	67.1063	8
TGGCTCA	88910	67.03642	5
CTCTCAG	52615	65.25765	4
TCTCAGC	55125	62.484634	5
CTCAGCT	55750	61.847736	6
ACCCCTC	9740	39.151745	145