EGAF00004852582 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00004852582
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	8623753
Sequences flagged as poor quality	0
Sequence length	151
%GC	51

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTGATGGCTCAAACACAGCGACCTCGGGTGGGAACACGTTTTTCAGGTCC	254056	2.9460027438169902	No Hit
CTGATGGCTCAAACACAGCGACCTCGGGTGGGAACACCTTGTTCAGGTCC	141621	1.6422200403930862	No Hit
TCTGATGGCTCAAACACAGCGACCTCGGGTGGGAACACGTTTTTCAGGTC	117189	1.3589095142219403	No Hit
TCTGATGGCTCAAACACAGCGACCTCGGGTGGGAACACCTTGTTCAGGTC	63222	0.7331146891614359	No Hit
GATGGCTCAAACACAGCGACCTCGGGTGGGAACACGTTTTTCAGGTCCTC	33292	0.3860500178982399	No Hit
TGATGGCTCAAACACAGCGACCTCGGGTGGGAACACGTTTTTCAGGTCCT	26402	0.3061544086431975	No Hit
GATGGCTCAAACACAGCGACCTCGGGTGGGAACACCTTGTTCAGGTCCTC	18867	0.218779457157458	No Hit
AGTCTCTCAGCTGGTACACGGCAGGGTCAGGGTTCTGGATATCAGGCCTG	15596	0.18084933555031088	No Hit
TGATGGCTCAAACACAGCGACCTCGGGTGGGAACACCTTGTTCAGGTCCT	15008	0.1740309584469778	No Hit
AGTCTCTCAGCTGGTACACGGCAGGGTCAGGGTTCTGGATATTTGCTTTA	12077	0.1400434358451593	No Hit
AGTCTCTCAGCTGGTACACGGCAGGGTCAGGGTTCTGGATATAGGGCTGG	10437	0.12102619358416225	No Hit
AGTCTCTCAGCTGGTACACGGCAGGGTCAGGGTTCTGGATATTTGGCTTC	8942	0.1036903538401436	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TCTGATG	29120	113.41675	1
AGTCTCT	32425	101.04717	1
GTCTCTC	35125	93.27979	2
CTGATGG	79360	89.44222	1
TCTCTCA	36795	88.83982	3
CTCAAAC	89630	79.35717	8
GGCTCAA	88810	79.175606	6
GATGGCT	89295	78.48394	3
GCTCAAA	90070	78.30143	7
TCAAACA	91150	78.10541	9
TGGCTCA	94265	74.89375	5
ATGGCTC	95970	73.35125	4
TCAGCTG	45490	72.00399	7
AGCTGGT	45385	71.403824	9
TGATGGC	100660	70.63119	2
CAGCTGG	46370	69.94959	8
TCTCAGC	59015	55.809303	5
CTCAGCT	59480	55.628963	6
CTCTCAG	59850	54.957684	4
ACCCCTC	12420	45.821236	145