EGAF00004852593 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00004852593
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	19828283
Sequences flagged as poor quality	0
Sequence length	151
%GC	47

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTGATGGCTCAAACACAGCGACCTCGGGTGGGAACACGTTTTTCAGGTCC	195597	0.9864545508050293	No Hit
CTGATGGCTCAAACACAGCGACCTCGGGTGGGAACACCTTGTTCAGGTCC	138343	0.6977053938558371	No Hit
TCTGATGGCTCAAACACAGCGACCTCGGGTGGGAACACGTTTTTCAGGTC	108890	0.5491650487336699	No Hit
TCTGATGGCTCAAACACAGCGACCTCGGGTGGGAACACCTTGTTCAGGTC	74255	0.37449031769417457	No Hit
AGTCTCTCAGCTGGTACACGGCAGGGTCAGGGTTCTGGATATTTGGCTGG	44462	0.22423525022312826	No Hit
AGTCTCTCAGCTGGTACACGGCAGGGTCAGGCTTCTGGATATTTGGCTGG	37874	0.19100998306308217	No Hit
AGTCTCTCAGCTGGTACACGGCAGGGTCAGGCTTCTGGATATGTGGTAAA	37482	0.18903300906084505	No Hit
AGTCTCTCAGCTGGTACACGGCAGGGTCAGGGTTCTGGATATTTGGCTTC	32790	0.16536984064631316	No Hit
AGTCTCTCAGCTGGTACACGGCAGGGTCAGGCTTCTGGATATTTGGCTTC	20880	0.10530412542528267	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
AGTCTCT	61075	114.46647	1
GTCTCTC	68275	102.80138	2
TCTCTCA	72460	96.95101	3
TCTGATG	35375	89.25004	1
CTCTCAG	89705	78.684044	4
TCTCAGC	90310	78.09509	5
CAGCTGG	91560	77.24263	8
CTCAGCT	91620	77.15195	6
CTGATGG	73985	77.1012	1
GGCTCAA	75220	75.36719	6
GATGGCT	76565	74.08165	3
GCTCAAA	76700	74.03562	7
CTCAAAC	76780	73.911896	8
TCAAACA	77615	73.1921	9
AGCTGGT	97875	72.370544	9
TGATGGC	89660	63.675816	2
TCAGCTG	116485	60.73896	7
TGGCTCA	108745	52.452087	5
ATGGCTC	119050	48.00308	4
AACCACA	19910	38.876156	145