FastQCFastQC Report
Sat 4 Jun 2022
EGAF00004852601

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004852601
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences20484318
Sequences flagged as poor quality0
Sequence length161
%GC50

[WARN]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
AGATCTCGGTCTGATGGCTCAAACACAGCGACCTCGGGTGGGAACACGTT331280.16172371469726254No Hit
AGATCTCGGTAGTCTCTCAGCTGGTACACGGCAGGGTCAGGGTTCTGGAT328260.16024941616313515No Hit
AGATCTCGGTAGTCTCTCAGCTGGTACACGGCAGGGTCAGGCTTCTGGAT271030.1323109707630979No Hit
AGATCTCGGTTCTGATGGCTCAAACACAGCGACCTCGGGTGGGAACACGT244790.11950117157915631No Hit
AGATCTCGCCCTGATGGCTCAAACACAGCGACCTCGGGTGGGAACACGTT224810.10974736869443248No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)