FastQCFastQC Report
Wed 27 Apr 2022
EGAF00004852606

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004852606
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences13080780
Sequences flagged as poor quality0
Sequence length161
%GC52

[WARN]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
AGATCTCGGTAGTCTCTCAGCTGGTACACGGCAGGGTCAGGGTTCTGGAT1274940.974666648319137No Hit
AGATCTCGGTTCTGATGGCTCAAACACAGCGACCTCGGGTGGGAACACGT878040.6712443753354158No Hit
AGATCTCGGTCTGATGGCTCAAACACAGCGACCTCGGGTGGGAACACGTT637910.48766969553803363No Hit
AGATCTCGGTTCTGATGGCTCAAACACAGCGACCTCGGGTGGGAACACCT428200.3273505096790864No Hit
AGATCTCGCCCTGATGGCTCAAACACAGCGACCTCGGGTGGGAACACGTT426320.3259132865165533No Hit
AGATCTCGCCAGTCTCTCAGCTGGTACACGGCAGGGTCAGGGTTCTGGAT399860.3056851349843052No Hit
AGATCTCGGCAGTCTCTCAGCTGGTACACGGCAGGGTCAGGGTTCTGGAT381280.2914810890482066No Hit
AGATCTCGGCCTGATGGCTCAAACACAGCGACCTCGGGTGGGAACACGTT333470.25493128085634037No Hit
AGATCTCGGTCTGATGGCTCAAACACAGCGACCTCGGGTGGGAACACCTT322640.24665195806366286No Hit
AGATCTCGGCTCTGATGGCTCAAACACAGCGACCTCGGGTGGGAACACGT302840.23151524603272894No Hit
AGATCTCGCCTCTGATGGCTCAAACACAGCGACCTCGGGTGGGAACACGT293420.22431384061195125No Hit
AGATCTCGGTGTCTCTCAGCTGGTACACGGCAGGGTCAGGGTTCTGGATA249080.1904167794275265No Hit
AGATCTCGCCCTGATGGCTCAAACACAGCGACCTCGGGTGGGAACACCTT200440.15323245249901002No Hit
AGATCTCGGCCTGATGGCTCAAACACAGCGACCTCGGGTGGGAACACCTT155220.11866264855765482No Hit
AGATCTCGGCTCTGATGGCTCAAACACAGCGACCTCGGGTGGGAACACCT138360.1057735089191929No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)