FastQCFastQC Report
Wed 27 Apr 2022
EGAF00004852618

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004852618
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences9945922
Sequences flagged as poor quality0
Sequence length151
%GC46

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CTGATGGCTCAAACACAGCGACCTCGGGTGGGAACACGTTTTTCAGGTCC448510.45094864005569313No Hit
CTGATGGCTCAAACACAGCGACCTCGGGTGGGAACACCTTGTTCAGGTCC359780.36173619700617No Hit
TCTGATGGCTCAAACACAGCGACCTCGGGTGGGAACACGTTTTTCAGGTC263480.26491259432760483No Hit
AGTCTCTCAGCTGGTACACGGCAGGGTCAGGGTTCTGGATATTGGGTTTC241230.24254161655400072No Hit
TCTGATGGCTCAAACACAGCGACCTCGGGTGGGAACACCTTGTTCAGGTC202890.2039931541791701No Hit
AGTCTCTCAGCTGGTACACGGCAGGGTCAGGGTTCTGGATATATAGCCCA124820.1254986717169107No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)