FastQCFastQC Report
Sat 4 Jun 2022
EGAF00004852628

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004852628
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences25770310
Sequences flagged as poor quality0
Sequence length151
%GC51

[WARN]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
AGTCTCTCAGCTGGTACACGGCAGGGTCAGGCTTCTGGATATTGGGTTTC1631460.6330773669389309No Hit
AGTCTCTCAGCTGGTACACGGCAGGGTCAGGGTTCTGGATATTGGGTTTC1443940.5603114591947089No Hit
CTGATGGCTCAAACACAGCGACCTCGGGTGGGAACACGTTTTTCAGGTCC1282730.49775497462001816No Hit
TCTGATGGCTCAAACACAGCGACCTCGGGTGGGAACACGTTTTTCAGGTC811870.3150408357524609No Hit
CTGATGGCTCAAACACAGCGACCTCGGGTGGGAACACCTTGTTCAGGTCC621080.24100602592673506No Hit
TCTGATGGCTCAAACACAGCGACCTCGGGTGGGAACACCTTGTTCAGGTC388330.1506889129389596No Hit
GTCTCTCAGCTGGTACACGGCAGGGTCAGGCTTCTGGATATTGGGTTTCA352390.13674263134591708No Hit
GTCTCTCAGCTGGTACACGGCAGGGTCAGGGTTCTGGATATTGGGTTTCA313960.1218301215623716No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)