FastQCFastQC Report
Wed 11 May 2022
EGAF00004852632

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004852632
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences19213878
Sequences flagged as poor quality0
Sequence length151
%GC48

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CTGATGGCTCAAACACAGCGACCTCGGGTGGGAACACGTTTTTCAGGTCC2363571.2301368833506698No Hit
TCTGATGGCTCAAACACAGCGACCTCGGGTGGGAACACGTTTTTCAGGTC2264281.178460693879705No Hit
AGTCTCTCAGCTGGTACACGGCAGGGTCAGGGTTCTGGATATGGGGTTTG2256351.1743334687562814No Hit
CTGATGGCTCAAACACAGCGACCTCGGGTGGGAACACCTTGTTCAGGTCC1147350.5971465000454359No Hit
TCTGATGGCTCAAACACAGCGACCTCGGGTGGGAACACCTTGTTCAGGTC1087110.5657941619073463No Hit
GTCTCTCAGCTGGTACACGGCAGGGTCAGGGTTCTGGATATGGGGTTTGA445690.23196254290778778No Hit
CTCTCAGCTGGTACACGGCAGGGTCAGGGTTCTGGATATGGGGTTTGACC304820.15864574553871946No Hit
AGTCTCTCAGCTGGTACACGGCAGGGTCAGGGTTCTGGATATTTGGAATG247700.12891723367869828No Hit
TGATGGCTCAAACACAGCGACCTCGGGTGGGAACACGTTTTTCAGGTCCT192490.10018279495685359No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)