EGAF00004852789 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00004852789
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	44503071
Sequences flagged as poor quality	0
Sequence length	51
%GC	51

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTGGGAGGTCACTCTCCCCAGGCTCTGTCCAAGTGGCATAGGGGAGCTTAG	70744	0.15896431057533086	No Hit
CGTGGCGACCCGCTGAATTTAAGCATATTAGTCAGCGGAGGAGAAGAAACT	70013	0.15732172730281915	No Hit
GCTGAATTTAAGCATATTAGTCAGCGGAGGAGAAGAAACTAACCAGGATTC	66688	0.14985033280062854	No Hit
TTTCTATAGTGTGTTACTAGAGAAGTTTCTCTGAACGTGTAGAGCACCGAA	63708	0.14315416569791328	No Hit
CGCTGAATTTAAGCATATTAGTCAGCGGAGGAGAAGAAACTAACCAGGATT	58621	0.13172349386854673	No Hit
CGAGGGTTCAGCTGTCTCTTACTTTTAACCAGTGAAATTGACCTGCCCGTG	55718	0.12520034853325065	No Hit
CATTTCTATAGTGTGTTACTAGAGAAGTTTCTCTGAACGTGTAGAGCACCG	51360	0.11540776590451478	No Hit
ATCAGACGTGGCGACCCGCTGAATTTAAGCATATTAGTCAGCGGAGGAGAA	48829	0.10972051793908784	No Hit
CAGACGTGGCGACCCGCTGAATTTAAGCATATTAGTCAGCGGAGGAGAAGA	44537	0.10007623968242552	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
TCAGACG	21625	15.148046	2
GTCACTC	30475	15.084731	8
GGTCACT	31145	14.580284	7
GGGAGGT	33465	14.292594	3
AGGTCAC	32875	14.101724	6
ACTCTCC	33055	13.853938	11
GAGGTCA	34430	13.792979	5
TCACTCT	34860	13.309327	9
TGCCCGT	20860	13.243214	44
GGAGGTC	37160	12.956172	4
CACTCTC	36045	12.559541	10
TGGGAGG	31325	12.331916	2
CGTCGAT	5515	12.15372	12
ACCCGGC	7490	12.0739975	5
ATAGCTC	6845	11.70204	39
GCGTCGA	5700	11.680179	11
CAGACGT	28305	11.5966015	3
AGCTTAG	31595	11.306464	45
TCTCCCC	41020	11.09502	13
ATCAGAC	30160	11.092413	1