EGAF00004853070 FastQC Report

Basic Statistics

Measure	Value
Filename	EGAF00004853070
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	44773338
Sequences flagged as poor quality	0
Sequence length	51
%GC	51

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GCCGGCTTCACGCTCAGGAGAAAACGCTACCTCTCTTCCTCGTGGTTTTCG	376022	0.8398346355145556	No Hit
CTCAGACCGCGTTCTCTCCCTCTCACTCCCCAATACGGAGAGAAGAACGAT	339396	0.7580314873999343	No Hit
CCGGCTTCACGCTCAGGAGAAAACGCTACCTCTCTTCCTCGTGGTTTTCGG	89596	0.20011016377648683	No Hit
CACTCAGACCGCGTTCTCTCCCTCTCACTCCCCAATACGGAGAGAAGAACG	72458	0.1618329194039542	No Hit
CTGGGCTCTTCCCTGTTCACTCGCCGTTACTGAGGGAATCCTGGTTAGTTT	71571	0.1598518296759558	No Hit
ACTCAGACCGCGTTCTCTCCCTCTCACTCCCCAATACGGAGAGAAGAACGA	70494	0.15744638025424865	No Hit
CTCGTCTTGCTGTGTCATGCCCGCCTCTTCACGGGCAGGTCAATTTCACTG	64295	0.1436010868789814	No Hit
CTTCCGTACGCCACATGTCCCGCGCCCCGCCGCGGGGCGGGGATTCGGCGC	61725	0.13786106365355205	No Hit
CCCAGCTTTATTTCCAACGTTGTGGAAAGGGACTTGTACATCATGGGGCAG	55036	0.12292136896293057	No Hit
GTTAAAAGTAAGAGACAGCTGAACCCTCGTGGAGCCATTCATACAGGTCCC	50255	0.11224313898597421	No Hit

Adapter graph

Kmer graph

Sequence	Count	Obs/Exp Max	Max Obs/Exp Position
GAACGAT	58305	29.033054	45
GCCGGCT	70265	28.870663	1
TCACGCT	84230	26.020288	8
AGACCGC	65930	26.001612	4
ACCGCGT	65545	25.9726	6
GACCGCG	65755	25.855438	5
CAGACCG	66965	25.66354	3
CCGGCTT	86020	25.565138	2
CCGCGTT	66940	25.421236	7
CGCGTTC	67475	25.203001	8
TCAGACC	69410	25.168087	2
TTCACGC	87880	25.036846	7
ACGCTAC	87425	24.779573	24
AACGCTA	87585	24.771818	23
AGAACGA	68745	24.763939	44
GTTTTCG	86775	24.74489	45
CGTGGTT	88465	24.478912	41
AAAACGC	88870	24.442184	21
CGCTACC	88475	24.433617	25
ACGCTCA	90675	24.40865	10