FastQCFastQC Report
Tue 28 Jun 2022
EGAF00004854070

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004854070
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences134441515
Sequences flagged as poor quality0
Sequence length126
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GATCGGAAGAGCGTCGTGTAGGGAAAGAGTGTAGATCTCGGTGGTCGCCG3325470.24735439793281117Illumina Single End PCR Primer 1 (100% over 50bp)
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA1801840.13402407730975063No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)