FastQCFastQC Report
Fri 27 May 2022
EGAF00004854207

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00004854207
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences137410619
Sequences flagged as poor quality0
Sequence length126
%GC47

[WARN]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GATCGGAAGAGCACACGTCTGAACTCCAGTCACACTGATATATCTCGTAT9736810.7085922522479867TruSeq Adapter, Index 25 (97% over 44bp)
TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT4307910.31350633825468754No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)