Basic Statistics
Measure | Value |
---|---|
Filename | EGAF00004858405 |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 136952934 |
Total Bases | 20.6 Gbp |
Sequences flagged as poor quality | 0 |
Sequence length | 151 |
%GC | 54 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
Sequence | Count | Percentage | Possible Source |
---|---|---|---|
GATCGGAAGAGCACACGTCTGAACTCCAGTCACTCCACGTTATCTCGTAT | 1082923 | 0.7907263965589815 | TruSeq Adapter, Index 6 (97% over 37bp) |
GATCGGAAGAGCACACGTCTGAACTCCAGTCACTCCACGTTATCGCGTAT | 374813 | 0.2736801535044149 | TruSeq Adapter, Index 6 (97% over 37bp) |
CCAGGCTGGAGTGCAGTGGCTATTCACAGGCGCGATCCCACTACTGATCA | 195553 | 0.1427884706727057 | No Hit |
CGGGGTCTCGCTATGTTGCCCAGGCTGGAGTGCAGTGGCTATTCACAGGC | 166150 | 0.12131905111284437 | No Hit |
CTCCGTTTCCGACCTGGGCCGGTTCACCCCTCCTTAGGCAACCTGGTGGT | 154876 | 0.11308702594133545 | No Hit |